Data normalization into FASTA format

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Explore Pipeline

Data normalization into FASTA format

A script pipeline to normalize and transform the DNA sequence into the standard FASTA format. Examples of properly formatted FASTA definition lines for nucleotide sequences: 
›Seq1 [organism=Streptomyces lavendulae] [strain=456A] Streptomyces lavendulae 
strain 456A mitomycin radical oxidase (mcrA) gene, complete cds.


›ABCD [organism=Plasmodium falciparum] [isolate=ABCD] Plasmodium falciparum 
isolate ABCD merozoite surface protein 2 (msp2) gene, partial cds.


›DNA.new [organism=Homo sapiens] [chromosome=17] [map=17q21] [moltype=mRNA] 
Homo sapiens breast and ovarian cancer susceptibility protein (BRCA1) mRNA, complete cds.
 

Related resources

dataset
DNA Sequences Multi-species
Updated 02/02/2023
By ai.market
project
Project title
Due date is 25 February 2023

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